Qualigenix codes Bronx charts to the rules of the plan that pays them, whether that's Fidelis Care, MetroPlus or Medicare.
Speak with our Medical Coding specialists today.



Qualigenix assigns each Bronx practice coders who know its specialty and the payers on its claims. The New York State Department of Health counted 844,529 Bronx County residents on Medicaid in June 2026, so a Bronx practice codes many charts against Medicaid plan policies as well as Medicare's. Rules that apply across the state, including audit and self-disclosure duties, sit on our medical coding services in New York page. This page covers the Bronx itself: the managed care plans whose policies we code to, the behavioral health rules those plans follow, and the Medicare contractor whose coverage policies decide which diagnoses support a procedure.
Qualigenix's medical coding services cover documentation review, ICD-10-CM, CPT and HCPCS Level II code assignment, modifier checks, medical necessity review, physician queries, two-level quality assurance and HCC coding.
Our CPC- and CCS-certified coders work Bronx charts for Medicaid managed care plans, Medicare and commercial payers inside your existing EHR. Pricing is a percentage of collections.
Qualigenix codes to the written policy of the plan on the claim. Seven mainstream issuers serve Bronx Medicaid members in 2026, and each publishes its own reimbursement and coding policies.
Affinity by Molina Healthcare, Anthem Blue Cross Blue Shield HealthPlus, EmblemHealth, Fidelis Care, Healthfirst, MetroPlus Health Plan and UnitedHealthcare Community Plan each apply their own edits for bundling, modifiers and units. Qualigenix keeps a policy file per plan, so a code pair that passes at one plan isn't assumed to pass at the next. When a plan denies a modifier, the appeal goes through denial management with that plan's policy cited.
For programs licensed by the state Office of Mental Health or the Office of Addiction Services and Supports, Bronx Medicaid plans and HARPs follow New York's Medicaid Managed Care Behavioral Health Billing and Coding Manual, updated October 2025. Its coding taxonomy ties each rate code to set procedure code and modifier combinations. The manual doesn't apply to office-based practitioners, who code standard CPT to each plan's policy. Qualigenix checks which rule set a chart falls under before assigning a single code.
New York's Office of the Medicaid Inspector General audits Medicaid providers and expects any overpayment a provider identifies to be self-disclosed. Our QA flags possible overpayments for your review. The statewide detail is on our New York medical coding rules page.
Qualigenix scores coding quality the same way on every account. The figures below are company-wide results across client practices, not Bronx-only results.

Qualigenix starts coding for a Bronx practice in six steps, and onboarding averages six days.
We sign the BAA and SLA, then agree on encounter types, code sets and turnaround for your charts.
Coders certified in your specialty join the account, and chart intake is set up inside your EHR.
We load the policies for each Bronx plan you bill, plus NGS coverage rules, into a written playbook for your account.
Coders review documentation on live charts and send compliant queries to providers when a note is incomplete.
Codes are assigned and checked through two levels of quality assurance before charts move to billing.
Coded charts export daily, and denial data flows back to your coders so the same error doesn't repeat.
Independent clinics and specialty practices in Bronx trust Qualigenix for dedicated claim support.
Every coder on a Bronx account holds CPC or CCS certification and works charts in your specialty. You don't get a generalist learning cardiology or behavioral health on your claims.
Qualigenix codes in 133 EMR and EHR platforms. Your providers keep documenting the way they do now, and our coders work in the same system.
Each chart passes a peer or auditor check, then statistical sampling scored by coder. Scores are shared with you so you can see quality by coder and specialty.
Onboarding averages six days from kickoff to coded charts. Your playbook for Bronx plans and NGS policies is written during setup, not after the first denials.
Frequently asked questions about our setup and support in Bronx.
Qualigenix codes for Bronx practices in 38+ specialties, using CPC- and CCS-certified coders who work inside your current EHR. We code to the policies of Bronx Medicaid plans, Medicare and commercial payers. Talk to a coding specialist about your chart volume.
Yes. We code to the policies of all seven mainstream Medicaid plans in the Bronx, plus HARPs and HIV special needs plans. For OMH- and OASAS-licensed programs, we follow the state's behavioral health billing and coding manual.
We check diagnosis-to-procedure matches against the local coverage determinations from National Government Services, the Medicare contractor for New York, before a claim is released. That catches medical necessity problems before submission.
Yes. Qualigenix coders hold CPC and CCS certifications and are assigned by specialty. Every chart also passes two levels of quality assurance before it goes to billing.
Yes. We run prospective and retrospective coding audits, with a 98.6% audit pass rate across client practices. Audits help you find and correct problems before OMIG or a plan reviewer does. Ask a coding specialist about audit scope.
Qualigenix charges a percentage of collections, and the exact percentage depends on specialty, chart volume and payer mix. A coding specialist can explain how it would apply to your practice.
No. What matters is whether coders know the Bronx plans' policies, NGS coverage rules and the state's behavioral health coding manual. Qualigenix writes those rules into each Bronx account's coding playbook.