Qualigenix bills every payer a Queens practice sees, from Healthfirst and Fidelis Care to Medicare and commercial plans, for a percentage of collections.
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Qualigenix runs Qualigenix medical billing services for independent practices across Queens. The payer mix here leans on Medicaid managed care. The New York State Department of Health counted 640,256 Queens residents in mainstream Medicaid managed care plans in July 2026, about a quarter of New York City's total. Most Medicaid claims from a Queens office go to a health plan, not to the state. That changes how billing has to work. Each plan has its own payer ID, filing window and appeal rules, and patients switch plans more often than practices notice. Qualigenix bills all payers, checks plan assignment before each visit, and keeps every plan's deadlines in the claim queue. For the rules that apply statewide, see our page on medical billing services in New York.
Qualigenix runs the full claim cycle for Queens practices: eligibility checks, charge review, claim scrubbing, submission to New York Medicaid plans, Medicare and commercial payers, payment posting, denial appeals and A/R follow-up. Specialty billers work inside your current EHR. Pricing is a percentage of collections, and practices go live in 6 days on average.
Claims are scrubbed and tracked across all major commercial and government payers in New york.
Qualigenix sends each Medicaid claim to the plan that covers the patient on the date of service. The state's July 2026 enrollment report lists seven mainstream Medicaid plans for New York City: Healthfirst, Fidelis Care, MetroPlus Health Plan, Anthem Blue Cross and Blue Shield, UnitedHealthcare, HIP of Greater New York (EmblemHealth) and Molina Healthcare of New York.
Healthfirst carried 925,252 New York City members in July 2026, followed by Fidelis Care at 526,421 and MetroPlus at 377,314. Each plan sets its filing window in its provider contract. MetroPlusHealth asks for claims within 90 days of the date of service, while other plans allow more time. Qualigenix loads each contracted window into the claim queue and confirms the member's plan before the claim is built, so a claim never goes to last month's plan.
Three special needs plans also serve New York City Medicaid members: Amida Care, MetroPlus SN and VNS Choice SNP. The seven mainstream plans also run Health and Recovery Plans (HARPs) for adults with behavioral health needs, with 63,922 New York City members in July 2026. Qualigenix flags SNP and HARP members at intake, so each claim carries the right plan, product and benefit package.
Fee-for-service New York Medicaid claims go through eMedNY, which expects claims within 90 days of the date of service and accepts later claims only with an approved delay reason. Qualigenix tracks every eMedNY claim by date of service and documents any delay reason before it's needed. The full statewide workflow sits on our New York medical billing page.
Qualigenix reports the figures below across its client practices nationwide. They're company-wide results, not Queens-only numbers. Your monthly report tracks the same measures for your own practice, defined the same way, so you can see where your claims stand against them each month.

Qualigenix moves a Queens practice from kickoff to live billing in six steps, and the average practice goes live in 6 days.
We sign a BAA and get access to your EHR and clearinghouse. You keep your current software.
We confirm each provider is enrolled with every plan you bill, including the New York City Medicaid plans you accept.
A specialty coder joins your account, and claim edits are set for your payer mix.
Claims, remittances and deposits are routed through Qualigenix, then tested with one live transaction.
The first batch of claims is checked line by line before anything goes out.
New claims go out daily while the team works your older A/R in parallel.
Independent clinics and specialty practices in Queens trust Qualigenix for dedicated claim support.
Your practice gets a named biller and a coder certified in your specialty. The same people work your claims every month, so they learn your providers and your plans.
Qualigenix works on 133 EMR and EHR platforms. There's no software change, no data migration and no new login for your front desk to learn.
Every month you get collections, denial rate, days in A/R and payer-level results, with each measure defined so you know exactly how it was counted.
Most practices go live in 6 days. Older A/R is worked in parallel, so cash from past claims keeps coming in during the switch.
Frequently asked questions about our setup and support in Queens.
Qualigenix bills for independent practices in Queens across 38+ specialties and all payers, including New York City's Medicaid managed care plans, Medicare and commercial insurers. When comparing companies, ask how each one tracks plan-specific filing windows. Our billing specialists can walk you through ours.
Yes. Qualigenix bills all payers, including every mainstream Medicaid plan serving New York City members, along with their HARP and special needs products. We check each patient's current plan before the visit, so claims go to the right plan the first time.
Each payer's filing window is loaded into the claim queue, from eMedNY's 90-day limit to each plan's contracted window. Claims are scrubbed and sent within days of the visit, and aging claims are worked before their deadlines. Ask a billing specialist for a filing review.
Yes. Qualigenix submits Traditional Medicare claims to National Government Services, the Jurisdiction K contractor for New York, and bills Medicare Advantage and Medicaid Advantage Plus plans directly. Dual-eligible claims are coordinated so secondary balances aren't left unbilled.
Qualigenix charges a percentage of collections, so our fee depends on what your practice actually collects. The exact percentage depends on your specialty, claim volume and payer mix. A billing specialist can quote it after reviewing your practice.
No. What matters is whether the billing team knows the plans your patients carry, files within each plan's window and follows up on every denial. Qualigenix works inside your existing EHR, so your staff's routine stays the same.
Yes. Qualigenix signs a BAA with every client before accessing any patient data, and all work happens through HIPAA-compliant systems with access limited to the team assigned to your account.